Class Hierarchy
- java.lang.Object
- htsjdk.samtools.cram.encoding.AbstractBitCodec<T> (implements htsjdk.samtools.cram.encoding.BitCodec<T>)
- htsjdk.samtools.cram.encoding.ByteArrayStopEncoding.ByteArrayStopCodec
- htsjdk.samtools.cram.encoding.BetaIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.ByteArrayLenEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.ByteArrayStopEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.EncodingFactory
- htsjdk.samtools.cram.encoding.ExternalByteArrayEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.ExternalByteEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.ExternalCompressor
- htsjdk.samtools.cram.encoding.ExternalIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.ExternalLongEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.GammaIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.GolombIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.GolombLongEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.GolombRiceIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.NullEncoding<T> (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.SubexponentialIntegerEncoding (implements htsjdk.samtools.cram.encoding.Encoding<T>)
- htsjdk.samtools.cram.encoding.AbstractBitCodec<T> (implements htsjdk.samtools.cram.encoding.BitCodec<T>)
Interface Hierarchy
Annotation Type Hierarchy
- htsjdk.samtools.cram.encoding.DataSeries (implements java.lang.annotation.Annotation)
- htsjdk.samtools.cram.encoding.DataSeriesMap (implements java.lang.annotation.Annotation)
Enum Hierarchy
- java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
- htsjdk.samtools.cram.encoding.DataSeriesType
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)