Package htsjdk.samtools.util
Class Md5CalculatingOutputStream
- java.lang.Object
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- java.io.OutputStream
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- htsjdk.samtools.util.Md5CalculatingOutputStream
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- All Implemented Interfaces:
Closeable
,Flushable
,AutoCloseable
public class Md5CalculatingOutputStream extends OutputStream
Class to generate an MD5 string for a file as it is being read
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Constructor Summary
Constructors Constructor Description Md5CalculatingOutputStream(OutputStream os, File digestFile)
Md5CalculatingOutputStream(OutputStream os, Path digestFile)
Constructor that takes in the OutputStream that we are wrapping and creates the MD5 MessageDigest
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
close()
void
flush()
String
md5()
void
write(byte[] b)
void
write(byte[] b, int off, int len)
void
write(int b)
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Methods inherited from class java.io.OutputStream
nullOutputStream
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Constructor Detail
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Md5CalculatingOutputStream
public Md5CalculatingOutputStream(OutputStream os, Path digestFile)
Constructor that takes in the OutputStream that we are wrapping and creates the MD5 MessageDigest
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Md5CalculatingOutputStream
public Md5CalculatingOutputStream(OutputStream os, File digestFile)
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Method Detail
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write
public void write(int b) throws IOException
- Specified by:
write
in classOutputStream
- Throws:
IOException
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write
public void write(byte[] b) throws IOException
- Overrides:
write
in classOutputStream
- Throws:
IOException
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write
public void write(byte[] b, int off, int len) throws IOException
- Overrides:
write
in classOutputStream
- Throws:
IOException
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md5
public String md5()
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close
public void close() throws IOException
- Specified by:
close
in interfaceAutoCloseable
- Specified by:
close
in interfaceCloseable
- Overrides:
close
in classOutputStream
- Throws:
IOException
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flush
public void flush() throws IOException
- Specified by:
flush
in interfaceFlushable
- Overrides:
flush
in classOutputStream
- Throws:
IOException
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