Here is a list of all class members with links to the classes they belong to:
- p -
- p_writeXmlTandemInput
: pappso::XtandemInputSaxHandler
- p_writeXmlTandemOutput
: pappso::XtandemOutputSaxHandler
- PappsoException()
: pappso::PappsoException
- parent
: pappso::FilterChargeDeconvolution::DataPointInfo
- parse()
: pappso::FastaReader
, pappso::OboPsiMod
- parseFastaFile()
: pappso::FastaFileIndexer
- parseFixedModification()
: pappso::PeptideModificatorPipeline
- parseLabeledModification()
: pappso::PeptideModificatorPipeline
- parseLine()
: pappso::OboPsiModTerm
- parseNoConstString()
: pappso::PeptideStrParser
- parseOnlyOne()
: pappso::FastaReader
- parsePotentialModification()
: pappso::PeptideModificatorPipeline
- parseString()
: pappso::PeptideStrParser
- parseStringToPeptide()
: pappso::PeptideStrParser
- peak
: pappso::SimplePeakIonMatch
- peakarea_
: ralab::base::ms::PeakPicker< TReal, TIntegrator >
- peakChanged()
: pappso::MassSpectrumWidget
- peakChangeEvent()
: pappso::MassSpectrumWidget
- PeakIntegrator
: ralab::base::ms::PeakPicker< TReal, TIntegrator >
- PeakIonIsotopeMatch()
: pappso::PeakIonIsotopeMatch
- PeakIonMatch()
: pappso::PeakIonMatch
- peakmass_
: ralab::base::ms::PeakPicker< TReal, TIntegrator >
- PeakPicker()
: ralab::base::ms::PeakPicker< TReal, TIntegrator >
- Peptide()
: pappso::Peptide
- peptideAnnotate()
: pappso::MassSpectrumWidget
- PeptideBuilder()
: pappso::PeptideBuilder
- PeptideFixedModificationBuilder()
: pappso::PeptideFixedModificationBuilder
- PeptideFragment()
: pappso::PeptideFragment
- PeptideFragmentIon()
: pappso::PeptideFragmentIon
- PeptideFragmentIonListBase()
: pappso::PeptideFragmentIonListBase
- PeptideIsotopeSpectrumMatch()
: pappso::PeptideIsotopeSpectrumMatch
- peptideListSize()
: pappso::GrpSubGroup
- PeptideMethioninRemove()
: pappso::PeptideMethioninRemove
- PeptideModificatorBase()
: pappso::PeptideModificatorBase
- PeptideModificatorPipeline()
: pappso::PeptideModificatorPipeline
- PeptideModificatorTee()
: pappso::PeptideModificatorTee
- PeptideNaturalIsotope()
: pappso::PeptideNaturalIsotope
- PeptideNaturalIsotopeAverage()
: pappso::PeptideNaturalIsotopeAverage
- PeptideNaturalIsotopeList()
: pappso::PeptideNaturalIsotopeList
- PeptideRawFragmentMasses()
: pappso::PeptideRawFragmentMasses
- PeptideSemiEnzyme()
: pappso::PeptideSemiEnzyme
- PeptideSizeFilter()
: pappso::PeptideSizeFilter
- PeptideSpectrumMatch()
: pappso::PeptideSpectrumMatch
- PeptideVariableModificationBuilder()
: pappso::PeptideVariableModificationBuilder
- PeptideVariableModificationReplacement()
: pappso::PeptideVariableModificationReplacement
- plot()
: pappso::MassSpectrumWidget
, pappso::XicWidget
- plotRangesChangedSignal()
: pappso::BasePlotWidget
- plottableDestructionRequestedSignal()
: pappso::BasePlotWidget
- plottableSelectionChangedSignal()
: pappso::BasePlotWidget
- pointerToString()
: pappso::Utils
- PpmPrecision()
: pappso::PpmPrecision
- PrecisionBase()
: pappso::PrecisionBase
- precisionChanged()
: pappso::PrecisionWidget
- PrecisionFactory
: pappso::DaltonPrecision
, pappso::MzPrecision
, pappso::PpmPrecision
, pappso::ResPrecision
- PrecisionWidget()
: pappso::PrecisionWidget
- precursorId
: pappso::TimsXicStructure
- precursorIntensity
: pappso::MsRunRetentionTime< T >::PeptideMs2Point
- PrecursorIonData()
: pappso::PrecursorIonData
- precursorIonNodesByPrecursorMz()
: pappso::MsRunDataSetTreeNode
- precursorNodeByProductSpectrumIndex()
: pappso::MsRunDataSetTree
- precursorNodesByPrecursorMz()
: pappso::MsRunDataSetTree
- prepareExtractor()
: pappso::MsRunXicExtractorDisk
- prepareXDeltaLineAndMeasure()
: pappso::BasePlotWidget
- pressedKeyCode
: pappso::BasePlotContext
- pressedMouseButtons
: pappso::BasePlotContext
- printInfos()
: pappso::GrpMapPeptideToSubGroupSet
, pappso::GrpPeptideSet
, pappso::GrpSubGroupSet
- privAddFixedModificationString()
: pappso::PeptideModificatorPipeline
- privAddPotentialModificationString()
: pappso::PeptideModificatorPipeline
- privContainsAll()
: pappso::GrpPeptideSet
- privMatchIonList()
: pappso::PeptideSpectrumMatch
- problem_
: ralab::base::ms::SimplePicker< TReal >
- process()
: pappso::XtandemSpectrumProcess
- processDriftTime()
: pappso::PwizMsRunReader
- processRetentionTime()
: pappso::PwizMsRunReader
- productNodesByPrecursorMz()
: pappso::MsRunDataSetTreeNode
- productNodesByPrecursorSpectrumIndex()
: pappso::MsRunDataSetTree
- Protein()
: pappso::Protein
- ProteinPeptideList()
: ProteinPeptideList
- push_back()
: pappso::GrpProtein
- pushBackIonMasses()
: pappso::PeptideRawFragmentMasses
- pushBackIonMz()
: pappso::PeptideRawFragmentMasses
- pushBackMatchSpectrum()
: pappso::PeptideRawFragmentMasses
- PwizMsFileReader()
: pappso::PwizMsFileReader
- PwizMsRunReader()
: pappso::PwizMsRunReader