libSBML Perl API
libSBML 5.17.2 Perl API
- r -
RadialGradient() :
RadialGradient
RateRule() :
RateRule
Reaction() :
Reaction
ReactionGlyph() :
ReactionGlyph
read() :
SBase
readAttributes() :
CompBase
readInto() :
XMLAttributes
readSBML() :
SBMLReader
readSBMLFromFile() :
SBMLReader
readSBMLFromString() :
SBMLReader
Rectangle() :
Rectangle
reduceToBinary() :
ASTNode
ReferenceGlyph() :
ReferenceGlyph
RelAbsVector() :
RelAbsVector
relativeTo() :
SBMLUri
remove() :
List
,
ListOf
,
ListOfColorDefinitions
,
ListOfCompartmentGlyphs
,
ListOfCompartmentReferences
,
ListOfCompartments
,
ListOfCompartmentTypes
,
ListOfConstraints
,
ListOfCurveElements
,
ListOfDeletions
,
ListOfDrawables
,
ListOfEventAssignments
,
ListOfEvents
,
ListOfExternalModelDefinitions
,
ListOfFbcAssociations
,
ListOfFluxBounds
,
ListOfFluxObjectives
,
ListOfFunctionDefinitions
,
ListOfFunctionTerms
,
ListOfGeneAssociations
,
ListOfGeneProducts
,
ListOfGlobalRenderInformation
,
ListOfGlobalStyles
,
ListOfGradientDefinitions
,
ListOfGradientStops
,
ListOfGraphicalObjects
,
ListOfGroups
,
ListOfInitialAssignments
,
ListOfInputs
,
ListOfInSpeciesTypeBonds
,
ListOfLayouts
,
ListOfLineEndings
,
ListOfLineSegments
,
ListOfLocalParameters
,
ListOfLocalRenderInformation
,
ListOfLocalStyles
,
ListOfMembers
,
ListOfModelDefinitions
,
ListOfMultiSpeciesTypes
,
ListOfObjectives
,
ListOfOutputs
,
ListOfOutwardBindingSites
,
ListOfParameters
,
ListOfPorts
,
ListOfPossibleSpeciesFeatureValues
,
ListOfQualitativeSpecies
,
ListOfReactionGlyphs
,
ListOfReactions
,
ListOfReferenceGlyphs
,
ListOfReplacedElements
,
ListOfRules
,
ListOfSpecies
,
ListOfSpeciesFeatures
,
ListOfSpeciesFeatureTypes
,
ListOfSpeciesFeatureValues
,
ListOfSpeciesGlyphs
,
ListOfSpeciesReferenceGlyphs
,
ListOfSpeciesReferences
,
ListOfSpeciesTypeComponentIndexes
,
ListOfSpeciesTypeComponentMapInProducts
,
ListOfSpeciesTypeInstances
,
ListOfSpeciesTypes
,
ListOfSubmodels
,
ListOfTextGlyphs
,
ListOfTransitions
,
ListOfUnitDefinitions
,
ListOfUnits
,
SBMLErrorLog
,
SubListOfSpeciesFeatures
,
XMLAttributes
,
XMLNamespaces
removeAdditionalGraphicalObject() :
Layout
removeAll() :
SBMLErrorLog
removeAssociation() :
Association
,
FbcAnd
,
FbcOr
removeAttr() :
XMLToken
removeChild() :
ASTNode
,
XMLNode
removeChildren() :
XMLNode
removeColorDefinition() :
RenderInformationBase
removeCompartment() :
Model
removeCompartmentGlyph() :
Layout
removeCompartmentReference() :
MultiCompartmentPlugin
removeCompartmentType() :
Model
removeConstraint() :
Model
removeDash() :
GraphicalPrimitive1D
removeDeletion() :
Submodel
removeElement() :
Polygon
,
RenderCurve
,
RenderGroup
removeEvent() :
Model
removeEventAssignment() :
Event
removeExternalModelDefinition() :
CompSBMLDocumentPlugin
removeFluxBound() :
FbcModelPlugin
removeFluxObjective() :
Objective
removeFromParentAndDelete() :
Delay
,
KineticLaw
,
ListOf
,
Model
,
ModelDefinition
,
Priority
,
ReplacedBy
,
SBase
,
SBaseRef
,
StoichiometryMath
,
Trigger
removeFromParentAndPorts() :
CompBase
removeFunctionDefinition() :
Model
removeFunctionTerm() :
Transition
removeGeneAssociation() :
FbcModelPlugin
removeGeneProduct() :
FbcModelPlugin
removeGlobalRenderInformation() :
RenderListOfLayoutsPlugin
removeGlobalStyle() :
GlobalRenderInformation
removeGradientDefinition() :
RenderInformationBase
removeGradientStop() :
GradientBase
removeGroup() :
GroupsModelPlugin
removeId() :
LocalStyle
removeInitialAssignment() :
Model
removeInput() :
Transition
removeInSpeciesTypeBond() :
MultiSpeciesType
removeL2Namespaces() :
LayoutExtension
,
RenderExtension
,
SBMLExtension
,
SBMLExtensionRegistry
removeLayout() :
LayoutModelPlugin
removeLineEnding() :
RenderInformationBase
removeLocalParameter() :
KineticLaw
removeLocalRenderInformation() :
RenderLayoutPlugin
removeLocalStyle() :
LocalRenderInformation
removeMember() :
Group
removeModelDefinition() :
CompSBMLDocumentPlugin
removeModifier() :
Reaction
removeMultiSpeciesType() :
MultiModelPlugin
removeNamespace() :
SBMLNamespaces
,
XMLToken
removeNestedCVTerm() :
CVTerm
removeObjective() :
FbcModelPlugin
removeOption() :
ConversionProperties
removeOutput() :
Transition
removeOutwardBindingSite() :
MultiSpeciesPlugin
removePackageNamespace() :
SBMLNamespaces
removeParameter() :
KineticLaw
,
Model
removePort() :
CompModelPlugin
removePossibleSpeciesFeatureValue() :
SpeciesFeatureType
removeProduct() :
Reaction
removeQualitativeSpecies() :
QualModelPlugin
removeReactant() :
Reaction
removeReaction() :
Model
removeReactionGlyph() :
Layout
removeReferenceGlyph() :
GeneralGlyph
removeReplacedElement() :
CompSBasePlugin
removeResolver() :
SBMLResolverRegistry
removeResource() :
CVTerm
removeRole() :
Style
removeRule() :
Model
removeRuleByVariable() :
Model
removeScale() :
Unit
removeSpecies() :
Model
removeSpeciesFeature() :
MultiSpeciesPlugin
removeSpeciesFeatureType() :
MultiSpeciesType
removeSpeciesFeatureValue() :
SpeciesFeature
removeSpeciesGlyph() :
Layout
removeSpeciesReferenceGlyph() :
Layout
,
ReactionGlyph
removeSpeciesType() :
Model
removeSpeciesTypeComponentIndex() :
MultiSpeciesType
removeSpeciesTypeComponentMapInProduct() :
MultiSpeciesReferencePlugin
removeSpeciesTypeInstance() :
MultiSpeciesType
removeStyle() :
GlobalRenderInformation
,
LocalRenderInformation
removeSubGlyph() :
GeneralGlyph
removeSubListOfSpeciesFeatures() :
ListOfSpeciesFeatures
removeSubmodel() :
CompModelPlugin
removeTextGlyph() :
Layout
removeTopLevelAnnotationElement() :
SBase
removeTransition() :
QualModelPlugin
removeType() :
Style
removeUnit() :
UnitDefinition
removeUnitDefinition() :
Model
renameMetaIdRefs() :
GraphicalObject
,
Port
,
SBase
,
SBasePlugin
renameSIdRefs() :
AssignmentRule
,
ASTNode
,
Compartment
,
CompartmentGlyph
,
CompartmentReference
,
Constraint
,
DefaultValues
,
Delay
,
EventAssignment
,
FbcReactionPlugin
,
FluxBound
,
FluxObjective
,
FunctionTerm
,
GeneProduct
,
GeneProductRef
,
GeneralGlyph
,
InitialAssignment
,
Input
,
InSpeciesTypeBond
,
KineticLaw
,
ListOfObjectives
,
Member
,
Model
,
MultiASTPlugin
,
MultiSpeciesType
,
Output
,
OutwardBindingSite
,
Port
,
PossibleSpeciesFeatureValue
,
Priority
,
QualitativeSpecies
,
RateRule
,
Reaction
,
ReactionGlyph
,
ReferenceGlyph
,
RenderCurve
,
RenderGroup
,
RenderInformationBase
,
ReplacedElement
,
Replacing
,
Rule
,
SBase
,
SBasePlugin
,
SBaseRef
,
SimpleSpeciesReference
,
Species
,
SpeciesFeature
,
SpeciesFeatureValue
,
SpeciesGlyph
,
SpeciesReferenceGlyph
,
SpeciesTypeComponentIndex
,
SpeciesTypeComponentMapInProduct
,
SpeciesTypeInstance
,
StoichiometryMath
,
Submodel
,
TextGlyph
,
Trigger
renameUnitSIdRefs() :
ASTNode
,
Compartment
,
Constraint
,
Delay
,
EventAssignment
,
FunctionDefinition
,
InitialAssignment
,
KineticLaw
,
Model
,
Parameter
,
Port
,
Priority
,
Rule
,
SBase
,
SBasePlugin
,
Species
,
StoichiometryMath
,
Trigger
RenderCubicBezier() :
RenderCubicBezier
RenderCurve() :
RenderCurve
RenderExtension() :
RenderExtension
RenderGraphicalObjectPlugin() :
RenderGraphicalObjectPlugin
RenderGroup() :
RenderGroup
RenderInformationBase() :
RenderInformationBase
RenderLayoutConverter() :
RenderLayoutConverter
RenderLayoutPlugin() :
RenderLayoutPlugin
RenderListOfLayoutsPlugin() :
RenderListOfLayoutsPlugin
RenderPoint() :
RenderPoint
RenderSBMLDocumentPlugin() :
RenderSBMLDocumentPlugin
RenderValidator() :
RenderValidator
reorder() :
UnitDefinition
replaceArgument() :
ASTNode
replaceChild() :
ASTNode
ReplacedBy() :
ReplacedBy
ReplacedElement() :
ReplacedElement
replaceElement() :
Submodel
replaceTopLevelAnnotationElement() :
SBase
Replacing() :
Replacing
representsValidDate() :
Date
resetElementNamespace() :
ListOfLayouts
resolve() :
SBMLFileResolver
,
SBMLResolver
,
SBMLResolverRegistry
resolveUri() :
SBMLFileResolver
,
SBMLResolver
,
SBMLResolverRegistry
returnsBoolean() :
ASTNode
Rule() :
Rule
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