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OpenMS
2.5.0
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This is the complete list of members for UTILProteomicsLFQ, including all inherited members.
align_(vector< FeatureMap > &feature_maps, vector< TransformationDescription > &transformations) | UTILProteomicsLFQ | inlineprotected |
alignAndLink_(vector< FeatureMap > &feature_maps, ConsensusMap &consensus_fraction, vector< TransformationDescription > &transformations, const double median_fwhm) | UTILProteomicsLFQ | inlineprotected |
calculateSeeds_(const MSExperiment &ms_centroided, FeatureMap &seeds, double median_fwhm) | UTILProteomicsLFQ | inlineprotected |
centroidAndCorrectPrecursors_(const String &mz_file, MSExperiment &ms_centroided) | UTILProteomicsLFQ | inlineprotected |
estimateMedianChromatographicFWHM_(MSExperiment &ms_centroided) | UTILProteomicsLFQ | inlineprotected |
getPeptideOccurrence_(const ConsensusMap &cons) | UTILProteomicsLFQ | inlineprotected |
link_(vector< FeatureMap > &feature_maps, double median_fwhm, double max_alignment_diff, ConsensusMap &consensus_fraction) | UTILProteomicsLFQ | inlineprotected |
main_(int, const char **) override | UTILProteomicsLFQ | inlineprotected |
mapId2MzMLs_(const map< String, String > &m2i) | UTILProteomicsLFQ | inlineprotected |
mapMzML2Ids_(StringList &in, StringList &in_ids) | UTILProteomicsLFQ | inlineprotected |
quantifyFraction_(const pair< unsigned int, std::vector< String > > &ms_files, const map< String, String > &mzfile2idfile, double median_fwhm, const multimap< Size, PeptideIdentification > &transfered_ids, ConsensusMap &consensus_fraction, vector< TransformationDescription > &transformations, double &max_alignment_diff, set< String > &fixed_modifications, set< String > &variable_modifications) | UTILProteomicsLFQ | inlineprotected |
recalibrateMasses_(MSExperiment &ms_centroided, vector< PeptideIdentification > &peptide_ids, const String &id_file_abs_path) | UTILProteomicsLFQ | inlineprotected |
registerOptionsAndFlags_() override | UTILProteomicsLFQ | inlineprotected |
transferIDsBetweenSameFraction_(const ConsensusMap &consensus_fraction, Size min_occurrence=3) | UTILProteomicsLFQ | inlineprotected |
transform_(vector< FeatureMap > &feature_maps, vector< TransformationDescription > &transformations) | UTILProteomicsLFQ | inlineprotected |
UTILProteomicsLFQ() | UTILProteomicsLFQ | inline |