Class FourChannelIntensityData


  • public class FourChannelIntensityData
    extends Object
    Holds a 4 short values for each cycle of a read. This is used, to store raw intensities, processed intensities, or noise. Note that for Illumina 1.1 and 1.3, these are floating point values, but are truncated to shorts to store here. Indices into the channel arrays are zero-based, i.e. the first cycle is 0.
    • Constructor Detail

      • FourChannelIntensityData

        public FourChannelIntensityData​(int numberOfCycles)
    • Method Detail

      • getA

        public short[] getA()
      • getC

        public short[] getC()
      • getG

        public short[] getG()
      • getT

        public short[] getT()
      • hashCode

        public int hashCode()
        Overrides:
        hashCode in class Object