skbio.alignment.TabularMSA.to_dict¶
-
TabularMSA.
to_dict
()[source]¶ Create a
dict
from thisTabularMSA
.State: Experimental as of 0.4.1.
- Returns
Dictionary constructed from the index labels and sequences in this
TabularMSA
.- Return type
dict
- Raises
ValueError – If index labels are not unique.
See also
from_dict
,index
,reassign_index
Examples
>>> from skbio import DNA, TabularMSA >>> seqs = [DNA('ACGT'), DNA('A--T')] >>> msa = TabularMSA(seqs, index=['a', 'b']) >>> dictionary = msa.to_dict() >>> dictionary == {'a': DNA('ACGT'), 'b': DNA('A--T')} True