RDKit
Open-source cheminformatics and machine learning.
Class Index
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  a  
DuplicatedSeedCache (RDKit::FMCS)   
  k  
MolFragment (RDKit::FMCS)   RingMatchTableSet (RDKit::FMCS)   
  e  
MolHistogram (RDKit::MolAlign)   ROMol (RDKit)   
AdjustQueryParameters (RDKit::MolOps)   KeyErrorException   MolHolder (RDKit)   RWMol (RDKit)   
And (RDKit::FilterMatchOps)   EleContrib (ForceFields::MMFF)   SubstructureCache::KeyNumericMetrics (RDKit::FMCS)   MolHolderBase (RDKit)   RxnSanitizeException (RDKit)   
AndQuery (Queries)   EmbeddedAtom (RDDepict)   
  l  
MolPickler (RDKit)   
  s  
AngleBendContrib (ForceFields::MMFF)   EmbeddedFrag (RDDepict)   MolPicklerException (RDKit)   
AngleBendContrib (ForceFields::UFF)   EmbedParameters (RDKit::DGeomHelpers)   LAP (RDKit::MolAlign)   MolSanitizeException (RDKit)   SDM (RDKit::MolAlign)   
AngleConstraintContrib (ForceFields::MMFF)   EnumerateLibrary (RDKit)   larger_of (RDKit)   MolStackElem (RDKit::Canon)   SDMolSupplier (RDKit)   
AngleConstraintContrib (ForceFields::UFF)   EnumerateLibraryBase (RDKit)   LessEqualQuery (Queries)   MolStackUnion (RDKit::Canon)   SDWriter (RDKit)   
argless (Rankers)   EnumerationParams (RDKit)   LessQuery (Queries)   MolSupplier (RDKit)   Seed (RDKit::FMCS)   
AromaticAtomIterator_ (RDKit)   EnumerationStrategyBase (RDKit)   Ligand (RDKit::StructureCheck)   MolWriter (RDKit)   SeedSet (RDKit::FMCS)   
Atom (RDKit)   EnumerationStrategyException (RDKit)   LinearCatalog (RDCatalog)   MultiFPBReader (RDKit)   SetQuery (Queries)   
AtomCompareFunctor (RDKit::Canon)   EqualityQuery (Queries)   LocaleSwitcher (RDKit::Utils)   
  n  
SLNParseException (RDKit)   
atomicData (RDKit)   EvenSamplePairsStrategy (RDKit)   ltDouble (RDKit)   SmartsMatcher (RDKit)   
AtomicParams (ForceFields::UFF)   ExclusionList (RDKit)   
  m  
Neighbourhood (RDKit::StructureCheck)   SmilesMolSupplier (RDKit)   
AtomIterator_ (RDKit)   ExecStatistics (RDKit::FMCS)   NewBond (RDKit::FMCS)   SmilesParseException (RDKit)   
AtomMonomerInfo (RDKit)   ExplicitBitVect   MatchingAtomIterator_ (RDKit)   Not (RDKit::FilterMatchOps)   SmilesParserParams (RDKit)   
AtomPDBResidueInfo (RDKit)   ExplicitFeature (RDFeatures)   Matrix (RDNumeric)   
  o  
SmilesWriter (RDKit)   
AtomRingQuery (RDKit)   
  f  
MaximumCommonSubgraph (RDKit::FMCS)   Snapshot (RDKit)   
AttribType (RDKit::SLNParse)   MaxMinPicker (RDPickers)   O3A (RDKit::MolAlign)   SparseBitVect   
AugmentedAtom (RDKit::StructureCheck)   FeatureFileParseException (RDKit)   MaxMinPickInfo (RDPickers)   O3AConstraint (RDKit::MolAlign)   SparseIntVect (RDKit)   
  b  
FileParseException (RDKit)   MCSAtomCompareParameters (RDKit)   O3AConstraintVect (RDKit::MolAlign)   SpecialChiralityAtomCompareFunctor (RDKit::Canon)   
FilterCatalog (RDKit)   MCSBondCompareParameters (RDKit)   O3AFuncData (RDKit::MolAlign)   SpecialSymmetryAtomCompareFunctor (RDKit::Canon)   
BadFileException (RDKit)   FilterCatalogEntry (RDKit)   MCSParameters (RDKit)   OopBendContrib (ForceFields::MMFF)   SquareMatrix (RDNumeric)   
BitCorrMatGenerator (RDInfoTheory)   FilterCatalogParams (RDKit)   MCSProgressData (RDKit)   Or (RDKit::FilterMatchOps)   streambuf (boost_adaptbx::python)   
BitVect   FilterData_t (RDKit)   MCSResult (RDKit)   OrQuery (Queries)   streambuf_capsule (boost_adaptbx::python)   
Bond (RDKit)   FilterHierarchyMatcher (RDKit)   MetricMatrixCalc (RDDataManip)   streambuf::ostream (boost_adaptbx::python)   StretchBendContrib (ForceFields::MMFF)   
bondholder (RDKit::Canon)   FilterMatch (RDKit)   MMFFAngle (ForceFields::MMFF)   ostream (boost_adaptbx::python)   StructChecker (RDKit::StructureCheck)   
BondIterator_ (RDKit)   FilterMatcherBase (RDKit)   MMFFAngleCollection (ForceFields::MMFF)   
  p  
StructCheckerOptions (RDKit::StructureCheck)   
BondStretchContrib (ForceFields::MMFF)   FilterProperty_t (RDKit)   MMFFAromCollection (ForceFields::MMFF)   StructCheckTautomer (RDKit::StructureCheck)   
BondStretchContrib (ForceFields::UFF)   ForceField (ForceFields)   MMFFAtomProperties (RDKit::MMFF)   Dict::Pair (RDKit)   SubstructLibrary (RDKit)   
BoundsMatrix (DistGeom)   ForceFieldContrib (ForceFields)   MMFFBndkCollection (ForceFields::MMFF)   pairGreater (Rankers)   SubstructureCache (RDKit::FMCS)   
  c  
ForwardSDMolSupplier (RDKit)   MMFFBond (ForceFields::MMFF)   pairLess (Rankers)   SymmMatrix (RDNumeric)   
FourthDimContrib (DistGeom)   MMFFBondCollection (ForceFields::MMFF)   ParamCollection (ForceFields::UFF)   
  t  
CachedMolHolder (RDKit)   FPBReader (RDKit)   MMFFChg (ForceFields::MMFF)   PathEntry (RDKit::StructureCheck)   
CachedSmilesMolHolder (RDKit)   FPHolderBase (RDKit)   MMFFChgCollection (ForceFields::MMFF)   PatternHolder (RDKit)   Target (RDKit::FMCS)   
CachedTrustedSmilesMolHolder (RDKit)   FragCatalogEntry (RDKit)   MMFFCovRadPauEle (ForceFields::MMFF)   PDBMolSupplier (RDKit)   TargetMatch (RDKit::FMCS)   
canon_atom (RDKit::Canon)   FragCatGenerator (RDKit)   MMFFCovRadPauEleCollection (ForceFields::MMFF)   PDBWriter (RDKit)   TArray2D (RDKit::FMCS)   
CartesianProductStrategy (RDKit)   FragCatParams (RDKit)   MMFFDef (ForceFields::MMFF)   PeriodicTable (RDKit)   TDTMolSupplier (RDKit)   
Catalog (RDCatalog)   FragFPGenerator (RDKit)   MMFFDefCollection (ForceFields::MMFF)   Point (RDGeom)   TDTWriter (RDKit)   
CatalogEntry (RDCatalog)   FragmenterBondType (RDKit::MolFragmenter)   MMFFDfsbCollection (ForceFields::MMFF)   Point2D (RDGeom)   DuplicatedSeedCache::TKey (RDKit::FMCS)   
CatalogParams (RDCatalog)   FreeChemicalFeature (ChemicalFeatures)   MMFFHerschbachLaurie (ForceFields::MMFF)   Point3D (RDGeom)   TorsionAngleContrib (ForceFields::MMFF)   
ChargeFix (RDKit::StructureCheck)   
  g  
MMFFHerschbachLaurieCollection (ForceFields::MMFF)   PointND (RDGeom)   TorsionAngleContrib (ForceFields::UFF)   
charptr_functor (RDKit)   MMFFMolProperties (RDKit::MMFF)   PositionConstraintContrib (ForceFields::UFF)   TorsionAngleContribM6 (ForceFields::CrystalFF)   
ChemicalFeature (ChemicalFeatures)   GasteigerParams (RDKit)   MMFFOop (ForceFields::MMFF)   PositionConstraintContrib (ForceFields::MMFF)   TorsionConstraintContrib (ForceFields::MMFF)   
ChemicalReaction (RDKit)   Graph (RDKit::FMCS)   MMFFOopCollection (ForceFields::MMFF)   Properties (RDKit::Descriptors)   TorsionConstraintContrib (ForceFields::UFF)   
ChemicalReactionException (RDKit)   GreaterEqualQuery (Queries)   MMFFPBCI (ForceFields::MMFF)   PropertyFunctor (RDKit::Descriptors)   Trajectory (RDKit)   
ChemicalReactionParserException (RDKit)   GreaterQuery (Queries)   MMFFPBCICollection (ForceFields::MMFF)   PySequenceHolder   Transform2D (RDGeom)   
ChiralAtomCompareFunctor (RDKit::Canon)   Grid3D (RDGeom)   MMFFProp (ForceFields::MMFF)   
  q  
Transform3D (RDGeom)   
ChiralSet (DistGeom)   GridException (RDGeom)   MMFFPropCollection (ForceFields::MMFF)   
  u  
ChiralViolationContrib (DistGeom)   gtIIPair (RDDepict)   MMFFStbn (ForceFields::MMFF)   Query (Queries)   
Composition2N (RDKit::FMCS)   
  h  
MMFFStbnCollection (ForceFields::MMFF)   QueryAtom (RDKit)   UFFAngle (ForceFields::UFF)   
Conformer (RDKit)   MMFFTor (ForceFields::MMFF)   QueryAtomIterator_ (RDKit)   UFFBond (ForceFields::UFF)   
ConformerException (RDKit)   SubstructureCache::HashKey (RDKit::FMCS)   MMFFTorCollection (ForceFields::MMFF)   QueryBond (RDKit)   UFFInv (ForceFields::UFF)   
ConstBondIterator_ (RDKit)   HashSet (RDKit::MolHash)   MMFFVdW (ForceFields::MMFF)   
  r  
UFFTor (ForceFields::UFF)   
CrippenParamCollection (RDKit::Descriptors)   HasPropQuery (RDKit)   MMFFVdWCollection (ForceFields::MMFF)   UFFVdW (ForceFields::UFF)   
CrippenParams (RDKit::Descriptors)   HasPropWithValueQuery (RDKit)   MMFFVdWRijstarEps (ForceFields::MMFF)   RandomSampleAllBBsStrategy (RDKit)   UniformGrid3D (RDGeom)   
  d  
HasPropWithValueQuery< TargetPtr, std::string > (RDKit)   MolAlignException (RDKit::MolAlign)   RandomSampleStrategy (RDKit)   
  v  
HeteroatomIterator_ (RDKit)   MolBundle (RDKit)   RangeQuery (Queries)   
Data3Ddescriptors   HierarchCatalog (RDCatalog)   MolCatalogEntry (RDKit)   RDAny (RDKit)   Value (RDKit::RDTypeTag::detail)   
DatastructsException   HierarchicalClusterPicker (RDPickers)   MolCatalogParams (RDKit)   rdLogger (boost::logging)   ValueErrorException   
DefaultTorsionBondSmarts (RDKit::MMFF::Tools)   
  i  
MolChemicalFeature (RDKit)   RDProps (RDKit)   VdWContrib (ForceFields::MMFF)   
DefaultTorsionBondSmarts (RDKit::UFF::Tools)   MolChemicalFeatureDef (RDKit)   RDValue (RDKit)   vdWContrib (ForceFields::UFF)   
DepictException (RDDepict)   ImplicitFeature (RDFeatures)   MolChemicalFeatureFactory (RDKit)   ReactionFingerprintParams (RDKit)   Vector (RDNumeric)   
Dict (RDKit)   IncEntry (RDKit::StructureCheck)   MolData3Ddescriptors   ReactionPickler (RDKit)   HierarchCatalog::vertex_entry_t (RDCatalog)   
DiscreteDistMat (RDKit)   IndexErrorException   MolDraw2D (RDKit)   ReactionPicklerException (RDKit)   
  x  
DiscreteValueVect (RDKit)   InfoBitRanker (RDInfoTheory)   MolDraw2DCairo (RDKit)   RecursiveStructureQuery (RDKit)   
DistanceConstraintContrib (ForceFields::MMFF)   Int2Type (Queries)   MolDraw2DQt (RDKit)   ResonanceMolSupplier (RDKit)   XOrQuery (Queries)   
DistanceConstraintContrib (ForceFields::UFF)   Invariant (Invar)   MolDraw2DSVG (RDKit)   RGroupDecomposition (RDKit)   
DistPicker (RDPickers)   InversionContrib (ForceFields::UFF)   MolDraw2Dwx (RDKit)   RGroupDecompositionParameters (RDKit)   
DistViolationContrib (DistGeom)   streambuf::istream (boost_adaptbx::python)   MolDrawOptions (RDKit)   RingInfo (RDKit)   
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