SeqAn3
The Modern C++ library for sequence analysis.
- s -
sam_dna16_vector :
seqan3::sam_dna16
score_type :
seqan3::gap_scheme< score_t >
,
seqan3::scoring_scheme_base< derived_t, alphabet_t, score_t >
sdsl_char_type :
seqan3::bi_fm_index< is_collection, sdsl_index_type_ >
,
seqan3::bi_fm_index_cursor< index_t >
,
seqan3::fm_index< is_collection, sdsl_index_type_ >
sdsl_index_type :
seqan3::bi_fm_index< is_collection, sdsl_index_type_ >
,
seqan3::fm_index< is_collection, sdsl_index_type_ >
sdsl_sigma_type :
seqan3::bi_fm_index< is_collection, sdsl_index_type_ >
,
seqan3::bi_fm_index_cursor< index_t >
,
seqan3::fm_index< is_collection, sdsl_index_type_ >
selected_field_ids :
seqan3::alignment_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::alignment_file_output< selected_field_ids_, valid_formats_, stream_char_type_, ref_ids_type >
,
seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::sequence_file_output< selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::structure_file_output< selected_field_ids_, valid_formats_, stream_char_type_ >
sentinel :
seqan3::alignment_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::alignment_file_output< selected_field_ids_, valid_formats_, stream_char_type_, ref_ids_type >
,
seqan3::alignment_range< alignment_executor_type >
,
seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::sequence_file_output< selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::structure_file_output< selected_field_ids_, valid_formats_, stream_char_type_ >
seq_alphabet :
seqan3::structure_file_input_default_traits_aa
,
seqan3::structure_file_input_default_traits_rna
seq_column_type :
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
seq_container :
seqan3::structure_file_input_default_traits_rna
seq_container_container :
seqan3::structure_file_input_default_traits_rna
seq_legal_alphabet :
seqan3::structure_file_input_default_traits_aa
,
seqan3::structure_file_input_default_traits_rna
seq_type :
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
sequence_alphabet :
seqan3::alignment_file_input_default_traits< ref_sequences_t, ref_ids_t >
,
seqan3::sequence_file_input_default_traits_aa
,
seqan3::sequence_file_input_default_traits_dna
sequence_alphabet_type :
seqan3::masked< sequence_alphabet_t >
,
seqan3::qualified< sequence_alphabet_t, quality_alphabet_t >
,
seqan3::structured_aa< sequence_alphabet_t, structure_alphabet_t >
,
seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
sequence_column_type :
seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
sequence_container :
seqan3::alignment_file_input_default_traits< ref_sequences_t, ref_ids_t >
,
seqan3::sequence_file_input_default_traits_dna
sequence_container_container :
seqan3::sequence_file_input_default_traits_dna
sequence_legal_alphabet :
seqan3::alignment_file_input_default_traits< ref_sequences_t, ref_ids_t >
,
seqan3::sequence_file_input_default_traits_aa
,
seqan3::sequence_file_input_default_traits_dna
sequence_quality_column_type :
seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
sequence_quality_type :
seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
sequence_type :
seqan3::alignment_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
size_type :
seqan3::aligned_allocator< value_t, alignment_v >
,
seqan3::alignment_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::alignment_file_output< selected_field_ids_, valid_formats_, stream_char_type_, ref_ids_type >
,
seqan3::bi_fm_index< is_collection, sdsl_index_type_ >
,
seqan3::bi_fm_index_cursor< index_t >
,
seqan3::bitcompressed_vector< alphabet_type >
,
seqan3::concatenated_sequences< inner_type, data_delimiters_type >
,
seqan3::fm_index< is_collection, sdsl_index_type_ >
,
seqan3::fm_index_cursor< index_t >
,
seqan3::gap_decorator< inner_type >
,
seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::sequence_file_output< selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::small_vector< value_type_, capacity_ >
,
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::structure_file_output< selected_field_ids_, valid_formats_, stream_char_type_ >
stream_char_type :
seqan3::alignment_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::alignment_file_output< selected_field_ids_, valid_formats_, stream_char_type_, ref_ids_type >
,
seqan3::sequence_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::sequence_file_output< selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
,
seqan3::structure_file_output< selected_field_ids_, valid_formats_, stream_char_type_ >
structure_alphabet :
seqan3::structure_file_input_default_traits_aa
,
seqan3::structure_file_input_default_traits_rna
structure_alphabet_type :
seqan3::structured_aa< sequence_alphabet_t, structure_alphabet_t >
,
seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
structure_column_type :
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
structure_container :
seqan3::structure_file_input_default_traits_rna
structure_container_container :
seqan3::structure_file_input_default_traits_rna
structure_type :
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
structured_seq_alphabet :
seqan3::structure_file_input_default_traits_aa
,
seqan3::structure_file_input_default_traits_rna
structured_seq_column_type :
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
structured_seq_container :
seqan3::structure_file_input_default_traits_rna
structured_seq_container_container :
seqan3::structure_file_input_default_traits_rna
structured_seq_type :
seqan3::structure_file_input< traits_type_, selected_field_ids_, valid_formats_, stream_char_type_ >
Generated on Mon Nov 25 2019 13:35:44 for SeqAn3 by
1.8.13