| ContiguousRange (std::ranges) | input_file_validator (seqan3) | quality_base (seqan3) | structure_file_input (seqan3) |
ConvertibleTo (std) | InputIterator (std) | QualityAlphabet (seqan3) | structure_file_input_default_traits_aa (seqan3) |
aa10li (seqan3) | Copyable (std) | InputRange (std::ranges) |
| structure_file_input_default_traits_rna (seqan3) |
aa10murphy (seqan3) | CopyConstructible (std) | insertion (seqan3::search_cfg) | structure_file_input_options (seqan3) |
aa20 (seqan3) |
| Integral (std) | RandomAccessContainer (seqan3) | structure_file_output (seqan3) |
aa27 (seqan3) | invalid_alignment_configuration (seqan3) | RandomAccessIterator (std) | structure_file_output_options (seqan3) |
aligned_allocator (seqan3) | debug_stream_type (seqan3) | invalid_char_assignment (seqan3) | RandomAccessRange (std::ranges) | structured_aa (seqan3) |
aligned_ends (seqan3::align_cfg) | deep (seqan3::view) | Invocable (std) | Range (std::ranges) | structured_rna (seqan3) |
AlignedSequence (seqan3) | DefaultConstructible (std) | io_error (seqan3) | Readable (std) | StructureFileInputFormat (seqan3) |
alignment_coordinate (seqan3) | deletion (seqan3::search_cfg) | is_aminoacid (seqan3) | aligned_allocator::rebind (seqan3) | StructureFileInputTraits (seqan3) |
alignment_file_header (seqan3) | DerivedFrom (std) | is_aminoacid< aa10li > (seqan3) | record (seqan3) | StructureFileOutputFormat (seqan3) |
alignment_file_input (seqan3) | Destructible (std) | is_aminoacid< aa10murphy > (seqan3) | ref_info_not_given (seqan3) | substitution (seqan3::search_cfg) |
alignment_file_input_default_traits (seqan3) | difference_type (seqan3) | is_aminoacid< aa20 > (seqan3) | reference (seqan3) | Swappable (std) |
alignment_file_input_options (seqan3) | difference_type< it_t > (seqan3) | is_aminoacid< aa27 > (seqan3) | reference< it_t > (seqan3) | SwappableWith (std) |
alignment_file_output (seqan3) | difference_type< rng_t > (seqan3) | is_constexpr_default_constructible (seqan3) | reference< rng_t > (seqan3) |
|
alignment_file_output_options (seqan3) | dna15 (seqan3) | is_constexpr_default_constructible< t > (seqan3) | regex_validator (seqan3) |
alignment_range (seqan3) | dna4 (seqan3) | is_execution_policy (seqan3) | Regular (std) | to_chars_result (std) |
alignment_result (seqan3) | dna5 (seqan3) | IStream (seqan3) | RegularInvocable (std) | too_few_arguments (seqan3) |
AlignmentFileInputFormat (seqan3) | dot_bracket3 (seqan3) | Iterator (std) | Relation (std) | too_many_arguments (seqan3) |
AlignmentFileInputTraits (seqan3) | dssp9 (seqan3) | iterator_tag (seqan3) | remove_rvalue_reference (seqan3) | total (seqan3::search_cfg) |
AlignmentFileOutputFormat (seqan3) |
|
| required_option_missing (seqan3) | TransformationTrait (seqan3) |
Alphabet (seqan3) | ReservableContainer (seqan3) | Trivial (seqan3) |
alphabet_base (seqan3) | end_gaps (seqan3) | lower_bound (seqan3) | result (seqan3::align_cfg) | TriviallyCopyable (seqan3) |
alphabet_base< derived_type, 1ul, char_t > (seqan3) | EqualityComparable (std) |
| rna15 (seqan3) | TriviallyDestructible (seqan3) |
alphabet_proxy (seqan3) | EqualityComparableWith (std) | rna4 (seqan3) | tuple_element< elem_no, seqan3::alignment_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > (std) |
alphabet_tuple_base (seqan3) | ExplicitlyConvertibleTo (seqan3) | mask (seqan3) | rna5 (seqan3) | tuple_element< elem_no, seqan3::record< field_types, field_ids > > (std) |
alphabet_variant (seqan3) |
| masked (seqan3) | RnaStructureAlphabet (seqan3) | tuple_element< elem_no, seqan3::sequence_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > (std) |
aminoacid_base (seqan3) | match_score (seqan3) | rvalue_reference (seqan3) | tuple_element< elem_no, seqan3::structure_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > (std) |
aminoacid_scoring_scheme (seqan3) | fields (seqan3) | max_error (seqan3::search_cfg) | rvalue_reference< it_t > (seqan3) | tuple_element< i, tuple_t > (std) |
AminoacidAlphabet (seqan3) | file_open_error (seqan3) | max_error (seqan3::align_cfg) | rvalue_reference< rng_t > (seqan3) | tuple_size< seqan3::alignment_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > (std) |
argument_parser (seqan3) | file_validator_base (seqan3) | max_error_rate (seqan3::search_cfg) |
| tuple_size< seqan3::record< field_types, field_ids > > (std) |
argument_parser_meta_data (seqan3) | FloatingPoint (seqan3) | mismatch_score (seqan3) | tuple_size< seqan3::sequence_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > (std) |
Arithmetic (seqan3) | fm_index (seqan3) | mode (seqan3::search_cfg) | sam_dna16 (seqan3) | tuple_size< seqan3::structure_file_input< traits_type, selected_field_ids, valid_formats, stream_char_t > > (std) |
arithmetic_range_validator (seqan3) | fm_index_cursor (seqan3) | mode (seqan3::align_cfg) | sam_tag_dictionary (seqan3) | tuple_size< tuple_t > (std) |
Assignable (std) | FmIndex (seqan3) | Movable (std) | sam_tag_type (seqan3) | TupleLike (seqan3) |
| FmIndexCursor (seqan3) | MoveConstructible (std) | Same (std) | type_conversion_failed (seqan3) |
format_bam (seqan3) |
| scoring (seqan3::align_cfg) | type_identity (std) |
back_end_first (seqan3) | format_embl (seqan3) | scoring_scheme_base (seqan3) |
|
back_end_second (seqan3) | format_error (seqan3) | nucleotide_base (seqan3) | ScoringScheme (seqan3) |
band (seqan3::align_cfg) | format_fasta (seqan3) | nucleotide_scoring_scheme (seqan3) | Semialphabet (seqan3) | UnaryTypeTrait (seqan3) |
bi_fm_index (seqan3) | format_fastq (seqan3) | NucleotideAlphabet (seqan3) | semialphabet_any (seqan3) | unexpected_end_of_input (seqan3) |
bi_fm_index_cursor (seqan3) | format_genbank (seqan3) |
| Semiregular (std) | unhandled_extension_error (seqan3) |
BidirectionalIterator (std) | format_sam (seqan3) | Sentinel (std) | unknown_option (seqan3) |
BidirectionalRange (std::ranges) | format_vienna (seqan3) | option_declared_multiple_times (seqan3) | sequence_end_gap_specifier_base (seqan3) | unsequenced_policy (seqan3) |
BiFmIndex (seqan3) | ForwardingRange (seqan3) | OStream (seqan3) | sequence_file_input (seqan3) | UnsignedIntegral (std) |
BiFmIndexCursor (seqan3) | ForwardIterator (std) | output (seqan3::search_cfg) | sequence_file_input_default_traits_aa (seqan3) | upper_bound (seqan3) |
bitcompressed_vector (seqan3) | ForwardRange (std::ranges) | output_directory_validator (seqan3) | sequence_file_input_default_traits_dna (seqan3) |
|
Boolean (std) | from_chars_result (std) | output_file_validator (seqan3) | sequence_file_input_options (seqan3) |
| front_end_first (seqan3) | OutputIterator (std) | sequence_file_output (seqan3) | validation_failed (seqan3) |
front_end_second (seqan3) | OutputRange (std::ranges) | sequence_file_output_options (seqan3) | Validator (seqan3) |
CerealArchive (seqan3) |
| overflow_error_on_conversion (seqan3) | SequenceContainer (seqan3) | value_list_validator (seqan3) |
CerealInputArchive (seqan3) |
| sequenced_policy (seqan3) | value_type (seqan3) |
Cerealisable (seqan3) | gap (seqan3::align_cfg) | SequenceFileInputFormat (seqan3) | value_type< it_t > (seqan3) |
CerealOutputArchive (seqan3) | gap (seqan3) | parallel_policy (seqan3) | SequenceFileInputTraits (seqan3) | value_type< rng_t > (seqan3) |
CerealTextArchive (seqan3) | gap_decorator (seqan3) | parallel_unsequenced_policy (seqan3) | SequenceFileOutputFormat (seqan3) | View (std::ranges) |
Char (seqan3) | gap_erase_failure (seqan3) | parse_error (seqan3) | SignedIntegral (std) | ViewableRange (std::ranges) |
cigar (seqan3) | gap_open_score (seqan3) | parser_design_error (seqan3) | size_type (seqan3) |
|
cigar_op (seqan3) | gap_scheme (seqan3) | parser_invalid_argument (seqan3) | size_type< it_t > (seqan3) |
Common (std) | gap_score (seqan3) | phred42 (seqan3) | size_type< rng_t > (seqan3) | WeaklyAssignable (seqan3) |
CommonRange (std::ranges) |
| phred63 (seqan3) | SizedRange (std::ranges) | WeaklyIncrementable (std) |
CommonReference (std) | phred68legacy (seqan3) | SizedSentinel (std) | WeaklyOrderedWith (seqan3) |
Compatible (seqan3) | hash< alphabet_t > (std) | pipeable_config_element (seqan3) | small_string (seqan3) | Writable (std) |
concatenated_sequences (seqan3) | hash< urng_t > (std) | plain_byte_alphabet (sdsl) | small_vector (seqan3) | WritableAlphabet (seqan3) |
configuration (seqan3) |
| pod_tuple (seqan3) | StandardLayout (seqan3) | WritableSemialphabet (seqan3) |
const_reference (seqan3) | pod_tuple< type0 > (seqan3) | static_band (seqan3) | wuss (seqan3) |
const_reference< rng_t > (seqan3) | ImplicitlyConvertibleTo (seqan3) | pod_tuple< type0, types... > (seqan3) | strata (seqan3::search_cfg) | |
ConstIterableRange (seqan3) | Incrementable (std) | Predicate (std) | Stream (seqan3) | |
Constructible (std) | incrementable_traits (std) | alignment_file_header::program_info_t (seqan3) | StrictTotallyOrdered (std) | |
Container (seqan3) | innermost_value_type (seqan3) |
| StrictTotallyOrderedWith (std) | |
ContiguousIterator (std) | input_directory_validator (seqan3) | StrictWeakOrder (std) | |
| | qualified (seqan3) | | |
| | | | |