vg
tools for working with variation graphs
Classes | Namespaces
surjector.hpp File Reference
#include <set>
#include "alignment.hpp"
#include "aligner.hpp"
#include "vg.hpp"
#include "translator.hpp"
#include "utility.hpp"
#include <vg/vg.pb.h>
#include "multipath_alignment_graph.hpp"
#include "memoizing_graph.hpp"
#include "split_strand_graph.hpp"
#include "algorithms/topological_sort.hpp"
#include "bdsg/hash_graph.hpp"

Classes

class  vg::Surjector
 

Namespaces

 vg
 

Detailed Description

A class to hold surjection algorithms that do lossy realignment restricted to paths in the graph