vg
tools for working with variation graphs
vg::ReadFilter Member List

This is the complete list of members for vg::ReadFilter, including all inherited members.

append_regionsvg::ReadFilter
buffer_sizevg::ReadFilter
complement_filtervg::ReadFilter
defray_countvg::ReadFilter
defray_lengthvg::ReadFilter
downsample_probabilityvg::ReadFilter
downsample_seed_maskvg::ReadFilter
drop_splitvg::ReadFilter
excluded_featuresvg::ReadFilter
excluded_refpos_contigsvg::ReadFilter
filter(istream *alignment_stream)vg::ReadFilter
filter_alignment(Alignment &aln)vg::ReadFilter
filter_on_allvg::ReadFilter
frac_scorevg::ReadFilter
graphvg::ReadFilter
has_repeat(Alignment &aln, int k)vg::ReadFilterprivate
interleavedvg::ReadFilter
is_split(Alignment &alignment)vg::ReadFilterprivate
max_overhangvg::ReadFilter
min_base_qualityvg::ReadFilter
min_base_quality_fractionvg::ReadFilter
min_end_matchesvg::ReadFilter
min_mapqvg::ReadFilter
min_primaryvg::ReadFilter
min_secondaryvg::ReadFilter
name_prefixesvg::ReadFilter
repeat_sizevg::ReadFilter
rescorevg::ReadFilter
sample_read(const Alignment &read)vg::ReadFilterprivate
sub_scorevg::ReadFilter
threadsvg::ReadFilter
trim_ambiguous_end(Alignment &alignment, int k)vg::ReadFilterprivate
trim_ambiguous_ends(Alignment &alignment, int k)vg::ReadFilter
verbosevg::ReadFilter
write_outputvg::ReadFilter