vg
tools for working with variation graphs
- o -
occs :
vg::MinimizerMapper::Minimizer
occurrences :
bdsg::HashGraph::node_t
offset :
vg::GaplessExtension
,
vg::PathBranch
,
vg::Position
,
vg::SnarlSeedClusterer::Seed
OFFSET_MASK :
vg::MIPayload
OFFSET_WIDTH :
vg::MIPayload
offsets :
xg::XGPath
offsets_rank :
xg::XGPath
offsets_select :
xg::XGPath
OLD_EDGE_TYPE_END_END :
xg::XG
OLD_EDGE_TYPE_END_START :
xg::XG
OLD_EDGE_TYPE_MAX :
xg::XG
OLD_EDGE_TYPE_MIN :
xg::XG
OLD_EDGE_TYPE_START_END :
xg::XG
OLD_EDGE_TYPE_START_START :
xg::XG
OLD_G_EDGE_LENGTH :
xg::XG
OLD_G_EDGE_OFFSET_OFFSET :
xg::XG
OLD_G_EDGE_TYPE_OFFSET :
xg::XG
OLD_G_NODE_FROM_COUNT_OFFSET :
xg::XG
OLD_G_NODE_TO_COUNT_OFFSET :
xg::XG
old_node :
haplo::hDP_gbwt_graph_accessor< GBWTType >
old_score :
vg::GaplessExtension
oneof_location :
vg::LocationSupport
opt_fields :
gafkluge::GafRecord
option_offsets :
vg::Configurable
options_by_code :
vg::ConfigurableParser
order :
vg::DozeuInterface::OrderedGraph
order_length_repeat_hit_max :
vg::MultipathMapper
OS :
vg::Version
other_orientation_timeout :
vg::RepresentativeTraversalFinder
other_supports :
vg::BREAKPOINT
out :
vg::MultipathAlignmentEmitter
out_file :
vg::HTSAlignmentEmitter
,
vg::io::GafAlignmentEmitter
,
vg::io::TSVAlignmentEmitter
,
vg::io::VGAlignmentEmitter
out_mutex :
vg::io::ProtobufEmitter< T >
out_stream :
vg::MCMCCaller
out_to :
vg::ExtraNodeGraph
outfile :
vg::Viz
output :
vg::io::hFILE_cppstream
output_in_progress :
vg::Funnel
output_is_bgzf :
vg::HTSAlignmentEmitter
output_names :
Vectorizer
output_png :
vg::Viz
output_svg :
vg::Viz
output_tabbed :
Vectorizer
output_variants :
vg::VCFOutputCaller
output_vcf :
vg::VCFOutputCaller
OUTPUT_VERSION :
vg::StreamIndexBase
outvcf :
vg::Deconstructor
overall_support :
vg::Locus
overlap :
vg::Edge
OVERLAP_THRESHOLD :
vg::GaplessExtender
overlapping_refs :
vg::SRPE
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