vg
tools for working with variation graphs
Functions
srpe_main.cpp File Reference
#include <iostream>
#include <vector>
#include <getopt.h>
#include <functional>
#include <regex>
#include <math.h>
#include "subcommand.hpp"
#include "../srpe.hpp"
#include <vg/io/stream.hpp>
#include <vg/io/vpkg.hpp>
#include "../index.hpp"
#include "../position.hpp"
#include "../path.hpp"
#include "../genotypekit.hpp"
#include "../genotyper.hpp"
#include "../path_index.hpp"
#include "../vg.hpp"
#include "xg.hpp"
#include "../filter.hpp"
#include "../utility.hpp"
#include "../translator.hpp"
#include <vg/vg.pb.h>
#include "Variant.h"
#include "Fasta.h"
#include <intervaltree/IntervalTree.h>

Functions

void help_srpe (char **argv)
 
int main_srpe (int argc, char **argv)
 

Function Documentation

◆ help_srpe()

void help_srpe ( char **  argv)

◆ main_srpe()

int main_srpe ( int  argc,
char **  argv 
)