vg
tools for working with variation graphs
Classes | Namespaces
gapless_extender.hpp File Reference
#include <functional>
#include <unordered_set>
#include "aligner.hpp"
#include <bdsg/hash_graph.hpp>
#include <gbwtgraph/cached_gbwtgraph.h>

Classes

struct  vg::GaplessExtension
 
class  vg::GaplessExtender
 

Namespaces

 vg
 

Detailed Description

Haplotype-consistent gapless seed extension.