This is the complete list of members for vg::MultipathAlignmentEmitter, including all inherited members.
aln_emitters | vg::MultipathAlignmentEmitter | private |
convert_multipath_alignment(const multipath_alignment_t &mp_aln, Alignment &aln, const string *prev_name=nullptr, const string *next_name=nullptr) const | vg::MultipathAlignmentEmitter | private |
emit_pairs(const string &name_1, const string &name_2, vector< pair< multipath_alignment_t, multipath_alignment_t >> &&mp_aln_pairs) | vg::MultipathAlignmentEmitter | |
emit_singles(const string &name, vector< multipath_alignment_t > &&mp_alns) | vg::MultipathAlignmentEmitter | |
graph | vg::MultipathAlignmentEmitter | private |
mp_aln_emitters | vg::MultipathAlignmentEmitter | private |
MultipathAlignmentEmitter(ostream &out, int num_threads, const HandleGraph &graph, const string out_format="gamp") | vg::MultipathAlignmentEmitter | |
multiplexer | vg::MultipathAlignmentEmitter | private |
out | vg::MultipathAlignmentEmitter | private |
read_group | vg::MultipathAlignmentEmitter | private |
sample_name | vg::MultipathAlignmentEmitter | private |
set_read_group(const string &read_group) | vg::MultipathAlignmentEmitter | |
set_sample_name(const string &sample_name) | vg::MultipathAlignmentEmitter | |
~MultipathAlignmentEmitter() | vg::MultipathAlignmentEmitter | |