vg
tools for working with variation graphs
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This is the complete list of members for vg::GraphCaller, including all inherited members.
break_chain(const HandleGraph &graph, const Chain &chain, size_t max_edges, size_t max_trivial) | vg::GraphCaller | protected |
call_snarl(const Snarl &snarl, int ploidy)=0 | vg::GraphCaller | pure virtual |
call_top_level_chains(const HandleGraph &graph, int ploidy, size_t max_edges, size_t max_trivial, bool recurse_on_fail=true) | vg::GraphCaller | virtual |
call_top_level_snarls(const HandleGraph &graph, int ploidy, bool recurse_on_fail=true) | vg::GraphCaller | virtual |
GraphCaller(SnarlCaller &snarl_caller, SnarlManager &snarl_manager) | vg::GraphCaller | |
snarl_caller | vg::GraphCaller | protected |
snarl_manager | vg::GraphCaller | protected |
~GraphCaller() | vg::GraphCaller | virtual |