vg
tools for working with variation graphs
- b -
b() :
vg::uniform_int_distribution< T >
,
vg::uniform_real_distribution< T >
BABuilder() :
vg::BandedGlobalAligner< IntType >::BABuilder
back() :
haplo::gbwt_thread_t
backtracking_unroll() :
vg::VG
BackUp() :
vg::io::BlockedGzipInputStream
,
vg::io::BlockedGzipOutputStream
BAMatrix() :
vg::BandedGlobalAligner< IntType >::BAMatrix
BandedGlobalAligner() :
vg::BandedGlobalAligner< IntType >
base_edge() :
vg::AugmentedGraph
base_entry_to_string() :
vg::Index
BaseMapper() :
vg::BaseMapper
BaseOption() :
vg::BaseOption< Value, Parser >
batch_edge() :
vg::Index
batch_kmer() :
vg::Index
batch_node() :
vg::Index
begin() :
handlegraph::PathForEachSocket
,
vg::Option< vector< Item >, Parser >
,
vg::PathIndex
,
vg::PhasedGenome
,
vg::ShuffledPairs
bfs() :
vg::FlowSort
bfs_left() :
vg::RepresentativeTraversalFinder
bfs_right() :
vg::RepresentativeTraversalFinder
bin_for_position() :
vg::Packer
bin_to_prefix() :
vg::StreamIndexBase
binary_extend_intervals() :
haplo::haplo_DP_column
BitString() :
vg::BitString
BlockedGzipInputStream() :
vg::io::BlockedGzipInputStream
BlockedGzipOutputStream() :
vg::io::BlockedGzipOutputStream
bluntify() :
vg::VG
bp_length() :
vg::NestedTraversalFinder
,
vg::RepresentativeTraversalFinder
break_chain() :
vg::GraphCaller
break_cycles() :
vg::VG
breakend_filter() :
vg::Filter
brute_force_alt_traversals() :
vg::VCFTraversalFinder
build_edge_indexes() :
vg::VG
build_edge_indexes_no_init_size() :
vg::VG
build_gbwt() :
vg::HaplotypeIndexer
build_indexes() :
vg::SnarlManager
,
vg::VG
build_indexes_no_init_size() :
vg::VG
build_indices() :
vg::PhasedGenome
build_node_indexes() :
vg::VG
build_node_indexes_no_init_size() :
vg::VG
build_position_table() :
vg::Translator
build_site_indices_internal() :
vg::PhasedGenome
ByteCount() :
vg::io::BlockedGzipInputStream
,
vg::io::BlockedGzipOutputStream
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