vg
tools for working with variation graphs
Classes | Namespaces
seed_clusterer.hpp File Reference
#include "snarls.hpp"
#include "min_distance.hpp"
#include "hash_map.hpp"
#include "small_bitset.hpp"
#include <structures/union_find.hpp>

Classes

class  vg::SnarlSeedClusterer
 
struct  vg::SnarlSeedClusterer::Seed
 Seed information used in Giraffe. More...
 
struct  vg::SnarlSeedClusterer::Cluster
 Cluster information used in Giraffe. More...
 
struct  vg::SnarlSeedClusterer::NetgraphNode
 
struct  vg::SnarlSeedClusterer::NodeClusters
 
struct  vg::SnarlSeedClusterer::TreeState
 

Namespaces

 vg