vg
tools for working with variation graphs
Public Attributes | List of all members
vg::SnarlSeedClusterer::Seed Struct Reference

Seed information used in Giraffe. More...

#include <seed_clusterer.hpp>

Public Attributes

pos_t pos
 
size_t source
 
bool is_top_level_node
 
size_t component
 
size_t offset
 
bool is_top_level_snarl
 
size_t snarl_rank
 
size_t start_length
 
size_t end_length
 
size_t node_length
 
bool rev_in_chain
 

Detailed Description

Seed information used in Giraffe.

Member Data Documentation

◆ component

size_t vg::SnarlSeedClusterer::Seed::component

◆ end_length

size_t vg::SnarlSeedClusterer::Seed::end_length

◆ is_top_level_node

bool vg::SnarlSeedClusterer::Seed::is_top_level_node

◆ is_top_level_snarl

bool vg::SnarlSeedClusterer::Seed::is_top_level_snarl

◆ node_length

size_t vg::SnarlSeedClusterer::Seed::node_length

◆ offset

size_t vg::SnarlSeedClusterer::Seed::offset

◆ pos

pos_t vg::SnarlSeedClusterer::Seed::pos

◆ rev_in_chain

bool vg::SnarlSeedClusterer::Seed::rev_in_chain

◆ snarl_rank

size_t vg::SnarlSeedClusterer::Seed::snarl_rank

◆ source

size_t vg::SnarlSeedClusterer::Seed::source

◆ start_length

size_t vg::SnarlSeedClusterer::Seed::start_length

The documentation for this struct was generated from the following file: