vg
tools for working with variation graphs
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Classes | |
struct | vg::algorithms::GFAFormatError |
This exception will be thrown if the GFA data is not acceptable. More... | |
Namespaces | |
vg | |
vg::algorithms | |
Functions | |
void | vg::algorithms::gfa_to_handle_graph (const string &filename, MutableHandleGraph *graph, bool try_from_disk, bool try_id_increment_hint) |
void | vg::algorithms::gfa_to_path_handle_graph (const string &filename, MutablePathMutableHandleGraph *graph, bool try_from_disk=true, bool try_id_increment_hint=false) |
Same as gfa_to_handle_graph but also adds path elements from the GFA to the graph. More... | |
void | vg::algorithms::gfa_to_path_handle_graph_in_memory (istream &in, MutablePathMutableHandleGraph *graph) |
Defines algorithms for copying data from GFA files into handle graphs