vg
tools for working with variation graphs
|
This is the complete list of members for vg::Funnel, including all inherited members.
annotate_mapped_alignment(Alignment &aln, bool annotate_correctness) | vg::Funnel | |
create_item() | vg::Funnel | protected |
expand(size_t prev_stage_item, size_t count) | vg::Funnel | |
fail(const char *filter, size_t prev_stage_item, double statistic=nan("")) | vg::Funnel | |
for_each_filter(const function< void(const string &, const string &, const FilterPerformance &, const FilterPerformance &, const vector< double > &, const vector< double > &)> &callback) const | vg::Funnel | |
for_each_stage(const function< void(const string &, const vector< size_t > &)> &callback) const | vg::Funnel | |
funnel_name | vg::Funnel | protected |
get_item(size_t index) | vg::Funnel | protected |
input_in_progress | vg::Funnel | protected |
introduce(size_t count=1) | vg::Funnel | |
is_correct(size_t item) const | vg::Funnel | |
last_correct_stage() const | vg::Funnel | |
latest() const | vg::Funnel | |
merge_group(Iterator prev_stage_items_begin, Iterator prev_stage_items_end) | vg::Funnel | |
output_in_progress | vg::Funnel | protected |
pass(const char *filter, size_t prev_stage_item, double statistic=nan("")) | vg::Funnel | |
processed_input() | vg::Funnel | |
processing_input(size_t prev_stage_item) | vg::Funnel | |
produced_output() | vg::Funnel | |
producing_output(size_t item) | vg::Funnel | |
project(size_t prev_stage_item) | vg::Funnel | |
project_group(size_t prev_stage_item, size_t group_size) | vg::Funnel | |
score(size_t item, double score) | vg::Funnel | |
stage(const string &name) | vg::Funnel | |
stage_name | vg::Funnel | protected |
stage_stop() | vg::Funnel | |
stages | vg::Funnel | protected |
start(const string &name) | vg::Funnel | |
stop() | vg::Funnel | |
substage(const string &name) | vg::Funnel | |
substage_name | vg::Funnel | protected |
substage_stop() | vg::Funnel | |
tag_correct(size_t item) | vg::Funnel | |
to_dot(ostream &out) | vg::Funnel | |
was_correct(size_t prev_stage_item) const | vg::Funnel |