vg
tools for working with variation graphs
Namespaces | Functions | Variables
prune.cpp File Reference
#include "prune.hpp"
#include <stack>

Namespaces

 vg
 

Functions

pair_hash_set< edge_t > vg::find_edges_to_prune (const HandleGraph &graph, size_t k, size_t edge_max)
 Iterate over all the walks up to length k, adding edges which. More...
 

Variables

constexpr size_t vg::PRUNE_THREAD_BUFFER_SIZE = 1024 * 1024