vg
tools for working with variation graphs
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#include <string>
#include <utility>
#include <memory>
#include <vector>
#include <map>
#include <gbwt/gbwt.h>
#include <gbwtgraph/gbwtgraph.h>
#include <gbwtgraph/minimizer.h>
#include "handle.hpp"
#include "min_distance.hpp"
#include "snarls.hpp"
#include "progressive.hpp"
Classes | |
class | vg::IndexManager |
Namespaces | |
vg | |
: defines a system for managing index files using a basename and constructing missing ones