vg
tools for working with variation graphs
vg::Funnel Member List

This is the complete list of members for vg::Funnel, including all inherited members.

annotate_mapped_alignment(Alignment &aln, bool annotate_correctness)vg::Funnel
create_item()vg::Funnelprotected
expand(size_t prev_stage_item, size_t count)vg::Funnel
fail(const char *filter, size_t prev_stage_item, double statistic=nan(""))vg::Funnel
for_each_filter(const function< void(const string &, const string &, const FilterPerformance &, const FilterPerformance &, const vector< double > &, const vector< double > &)> &callback) constvg::Funnel
for_each_stage(const function< void(const string &, const vector< size_t > &)> &callback) constvg::Funnel
funnel_namevg::Funnelprotected
get_item(size_t index)vg::Funnelprotected
input_in_progressvg::Funnelprotected
introduce(size_t count=1)vg::Funnel
is_correct(size_t item) constvg::Funnel
last_correct_stage() constvg::Funnel
latest() constvg::Funnel
merge_group(Iterator prev_stage_items_begin, Iterator prev_stage_items_end)vg::Funnel
output_in_progressvg::Funnelprotected
pass(const char *filter, size_t prev_stage_item, double statistic=nan(""))vg::Funnel
processed_input()vg::Funnel
processing_input(size_t prev_stage_item)vg::Funnel
produced_output()vg::Funnel
producing_output(size_t item)vg::Funnel
project(size_t prev_stage_item)vg::Funnel
project_group(size_t prev_stage_item, size_t group_size)vg::Funnel
score(size_t item, double score)vg::Funnel
stage(const string &name)vg::Funnel
stage_namevg::Funnelprotected
stage_stop()vg::Funnel
stagesvg::Funnelprotected
start(const string &name)vg::Funnel
stop()vg::Funnel
substage(const string &name)vg::Funnel
substage_namevg::Funnelprotected
substage_stop()vg::Funnel
tag_correct(size_t item)vg::Funnel
to_dot(ostream &out)vg::Funnel
was_correct(size_t prev_stage_item) constvg::Funnel