vg
tools for working with variation graphs
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#include "handle.hpp"
Namespaces | |
vg | |
Functions | |
void | vg::graph_to_gfa (const unique_ptr< PathHandleGraph > &graph, ostream &out) |
Export the given VG graph to the given GFA file. More... | |
Defines GFA I/O algorithms for PathHandleGraphs graphs.
Includes an algorithm for converting from GFA, including non-perfect-match edge overlaps and edges that specify containment of one node in another, to a blunt-ended VG.