vg
tools for working with variation graphs
vg::Deconstructor Member List

This is the complete list of members for vg::Deconstructor, including all inherited members.

check_max_nodes(const Snarl *snarl)vg::Deconstructorprivate
choose_traversals(const vector< int > &travs, const vector< int > &trav_to_allele, const vector< string > &trav_to_name)vg::Deconstructorprivate
deconstruct(vector< string > refpaths, const PathPositionHandleGraph *grpah, SnarlManager *snarl_manager, bool path_restricted_traversals, int ploidy, const unordered_map< string, string > *path_to_sample=nullptr)vg::Deconstructor
deconstruct_site(const Snarl *site)vg::Deconstructorprivate
Deconstructor()vg::Deconstructor
explicit_exhaustive_traversals(const Snarl *snarl)vg::Deconstructorprivate
get_alleles(vcflib::Variant &v, const vector< SnarlTraversal > &travs, int ref_path_idx, char prev_char, bool use_start)vg::Deconstructorprivate
get_genotypes(vcflib::Variant &v, const vector< string > &names, const vector< int > &trav_to_allele)vg::Deconstructorprivate
graphvg::Deconstructorprivate
max_nodes_for_exhaustivevg::Deconstructorprivate
outvcfvg::Deconstructorprivate
path_restrictedvg::Deconstructorprivate
path_to_samplevg::Deconstructorprivate
path_trav_findervg::Deconstructorprivate
ploidyvg::Deconstructorprivate
ref_pathsvg::Deconstructorprivate
sample_namesvg::Deconstructorprivate
snarl_managervg::Deconstructorprivate
trav_findervg::Deconstructorprivate
~Deconstructor()vg::Deconstructor