vg
tools for working with variation graphs
Classes | Namespaces
traversal_finder.hpp File Reference
#include <iostream>
#include <algorithm>
#include <functional>
#include <cmath>
#include <regex>
#include <limits>
#include <unordered_set>
#include <unordered_map>
#include <list>
#include <structures/immutable_list.hpp>
#include <vg/vg.pb.h>
#include "vg.hpp"
#include "translator.hpp"
#include "hash_map.hpp"
#include "utility.hpp"
#include "types.hpp"
#include "snarls.hpp"
#include "path_index.hpp"
#include "genotypekit.hpp"
#include "gbwt_helper.hpp"

Classes

class  vg::TraversalFinder
 
class  vg::ExhaustiveTraversalFinder
 
class  vg::SupportRestrictedTraversalFinder
 
class  vg::ReadRestrictedTraversalFinder
 
class  vg::PathRestrictedTraversalFinder
 
class  vg::PathBasedTraversalFinder
 
class  vg::PathTraversalFinder
 
class  vg::TrivialTraversalFinder
 
class  vg::RepresentativeTraversalFinder
 
class  vg::VCFTraversalFinder
 
class  vg::FlowTraversalFinder
 
class  vg::GBWTTraversalFinder
 

Namespaces

 vg